Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynhf family membrane protein | DIZ31_03310 | Not Available | Positive | 666653 - 666742 | 2997.87 |
| mfs transporter | DIZ31_03315 | Not Available | Positive | 666908 - 668077 | 40044.7 |
| superoxide dismutase | DIZ31_03320 | Not Available | Negative | 668223 - 668804 | 21276.8 |
| endopeptidase | DIZ31_03325 | Not Available | Negative | 668932 - 669759 | 30332.6 |
| glutaredoxin | DIZ31_03330 | Not Available | Positive | 670094 - 670441 | 12879.5 |
| endonuclease | DIZ31_03340 | Not Available | Negative | 670619 - 670720 | 3673.32 |
| ribonuclease t | DIZ31_03345 | Not Available | Negative | 670813 - 671460 | 23475.9 |
| lactoylglutathione lyase | DIZ31_03350 | Not Available | Negative | 671563 - 671970 | 14906.6 |
| alkene reductase | DIZ31_03355 | Not Available | Negative | 672051 - 673148 | 39532.7 |
| transcriptional regulator | DIZ31_03360 | Not Available | Negative | 673185 - 673784 | 22276.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





