Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 657606 - 657682 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 657687 - 657763 | Not Available |
| hypothetical protein | DIZ31_03270 | Not Available | Positive | 658071 - 659327 | 42822.6 |
| multidrug resistance protein mdtk | DIZ31_03275 | Not Available | Negative | 659368 - 660741 | 49434.2 |
| riboflavin synthase | DIZ31_03280 | Not Available | Positive | 660956 - 661597 | 23446.3 |
| cyclopropane-fatty-acyl-phospholipid synthase | DIZ31_03285 | Not Available | Negative | 661637 - 662785 | 43911.3 |
| bcr/cfla family multidrug efflux mfs transporter | DIZ31_03290 | Not Available | Negative | 663076 - 664287 | 43447.9 |
| lysr family transcriptional regulator | DIZ31_03295 | Not Available | Positive | 664400 - 665332 | 35265.0 |
| purr family transcriptional regulator | DIZ31_03300 | Not Available | Negative | 665329 - 666354 | 38167.0 |
| hypothetical protein | DIZ31_03305 | Not Available | Negative | 666342 - 666566 | 8725.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





