Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate kinase | DIZ31_03210 | Not Available | Negative | 647086 - 648498 | 50732.5 |
| fumarate hydratase fumd | DIZ31_03215 | Not Available | Positive | 649055 - 649264 | 7907.85 |
| 4fe-4s dicluster domain-containing protein | DIZ31_03220 | Not Available | Positive | 649720 - 650346 | 22357.2 |
| aldehyde ferredoxin oxidoreductase | DIZ31_03225 | Not Available | Positive | 650367 - 652469 | 77866.8 |
| ydhw family putative oxidoreductase system protein | DIZ31_03230 | Not Available | Positive | 652473 - 653120 | 24455.8 |
| thiosulfate reductase electron transport protein phsb | DIZ31_03235 | Not Available | Positive | 653184 - 653852 | 25041.9 |
| thiosulfate reductase cytochrome b subunit | DIZ31_03240 | Not Available | Positive | 653849 - 654634 | 29535.4 |
| hypothetical protein | DIZ31_03245 | Not Available | Positive | 654638 - 655450 | 29342.5 |
| fad-nad(p)-binding protein | DIZ31_03250 | Not Available | Negative | 655462 - 657066 | 60685.3 |
| monooxygenase | DIZ31_03255 | Not Available | Negative | 657192 - 657497 | 11304.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





