Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | DIZ31_03160 | Not Available | Positive | 638565 - 638975 | 14940.2 |
| hypothetical protein | DIZ31_03165 | Not Available | Positive | 638994 - 639263 | 10480.6 |
| iron-sulfur cluster assembly accessory protein | DIZ31_03170 | Not Available | Positive | 639812 - 640180 | 13314.9 |
| fe-s cluster assembly protein sufb | DIZ31_03175 | Not Available | Positive | 640189 - 641676 | 54728.1 |
| fe-s cluster assembly atpase sufc | DIZ31_03180 | Not Available | Positive | 641686 - 642432 | 27633.1 |
| signal peptide peptidase sppa | DIZ31_03185 | Not Available | Positive | 642407 - 643678 | 46754.4 |
| cysteine desulfurase | DIZ31_03190 | Not Available | Positive | 643675 - 644895 | 44394.3 |
| cysteine desulfuration protein sufe | DIZ31_03195 | Not Available | Positive | 644908 - 645324 | 15759.2 |
| lysm peptidoglycan-binding domain-containing protein | DIZ31_03200 | Not Available | Positive | 645472 - 646476 | 36040.4 |
| murein lipoprotein | DIZ31_03205 | Not Available | Negative | 646539 - 646775 | 8323.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





