Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Recombinase family protein | DIZ31_05570 | Not Available | Positive | 1097167 - 1097739 | 21638.7 |
| Attr | Not Available | Not Available | Positive | 1112608 - 1112622 | Not Available |
| Attl | Not Available | Not Available | Positive | 2012400 - 2012412 | Not Available |
| Dna replication protein | DIZ31_10220 | Not Available | Negative | 2014679 - 2015380 | 26576.1 |
| Replication protein o | DIZ31_10225 | Not Available | Negative | 2015377 - 2016396 | 37598.8 |
| Cii decision making protein | DIZ31_10230 | Not Available | Negative | 2016393 - 2016932 | 20159.2 |
| Helix-turn-helix domain-containing protein | DIZ31_10235 | Not Available | Negative | 2017002 - 2017232 | 8150.94 |
| Repressor protein | DIZ31_10240 | Not Available | Positive | 2017271 - 2018026 | 28165.8 |
| Kil protein | DIZ31_10245 | Not Available | Positive | 2018622 - 2018828 | 7717.32 |
| hypothetical | DIZ31_10250 | Not Available | Positive | 2018830 - 2018907 | 2613.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





