Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna glutamyl-q(34) synthetase gluqrs | DIZ31_02675 | Not Available | Negative | 541139 - 542065 | 34981.7 |
| rna polymerase-binding transcription factor dksa | DIZ31_02680 | Not Available | Negative | 542102 - 542557 | 17528.7 |
| dna/rna nuclease sfsa | DIZ31_02685 | Not Available | Negative | 542735 - 543439 | 26196.2 |
| rna 2',3'-cyclic phosphodiesterase | DIZ31_02690 | Not Available | Negative | 543454 - 543984 | 19965.1 |
| atp-dependent helicase hrpb | DIZ31_02695 | Not Available | Positive | 544058 - 546487 | 89289.3 |
| bifunctional glycosyl transferase/transpeptidase | DIZ31_02700 | Not Available | Positive | 546581 - 549106 | 93907.6 |
| type 1 fimbrial protein | DIZ31_02705 | Not Available | Positive | 549447 - 550013 | 19423.5 |
| molecular chaperone | DIZ31_02710 | Not Available | Positive | 550059 - 550775 | 26623.2 |
| fimbrial biogenesis outer membrane usher protein | DIZ31_02715 | Not Available | Positive | 550842 - 553319 | 91407.3 |
| type 1 fimbrial protein | DIZ31_02720 | Not Available | Positive | 553341 - 554351 | 36141.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





