Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | DIZ31_02060 | Not Available | Positive | 413405 - 413662 | 9381.61 |
| membrane protein insertase yidc | DIZ31_02065 | Not Available | Positive | 413665 - 415311 | 61512.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DIZ31_02070 | Not Available | Positive | 415417 - 416781 | 49199.8 |
| tryptophanase leader peptide | DIZ31_02075 | Not Available | Positive | 417023 - 417097 | 2894.56 |
| tryptophanase | DIZ31_02080 | Not Available | Positive | 417318 - 418733 | 52775.4 |
| low affinity tryptophan permease tnab | DIZ31_02085 | Not Available | Positive | 418825 - 420072 | 45273.3 |
| multidrug transporter mdtl | DIZ31_02090 | Not Available | Positive | 420204 - 421379 | 41439.1 |
| hth-type transcriptional regulator yidz | DIZ31_02095 | Not Available | Positive | 421354 - 422313 | 37022.1 |
| hypothetical protein | DIZ31_02100 | Not Available | Positive | 422470 - 423219 | 27648.2 |
| chromate reductase | DIZ31_02105 | Not Available | Positive | 423241 - 423807 | 20362.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





