Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prd domain-containing protein | DIZ31_01800 | Not Available | Negative | 360966 - 362519 | 59001.1 |
| alpha-xylosidase | DIZ31_01805 | Not Available | Negative | 362814 - 365132 | 87957.8 |
| glycoside-pentoside-hexuronide family transporter | DIZ31_01810 | Not Available | Negative | 365142 - 366524 | 50985.4 |
| Trna-sec(p) | Not Available | Not Available | Positive | 366817 - 366907 | Not Available |
| hydroxyacid dehydrogenase | DIZ31_01820 | Not Available | Positive | 366964 - 368001 | 40226.7 |
| hypothetical protein | DIZ31_01825 | Not Available | Positive | 368571 - 369068 | 18585.0 |
| eama family transporter | DIZ31_01830 | Not Available | Positive | 369246 - 370169 | 33129.5 |
| lipoprotein nlpa | DIZ31_01835 | Not Available | Negative | 370173 - 370991 | 29416.2 |
| hypothetical protein | DIZ31_01840 | Not Available | Positive | 371213 - 371506 | 11048.4 |
| purine ribonucleoside efflux pump nepi | DIZ31_01845 | Not Available | Negative | 371547 - 372737 | 41887.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





