Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna methyltransferase | DIZ31_01550 | Not Available | Positive | 311147 - 312766 | 60562.8 |
| restriction endonuclease subunit s | DIZ31_01555 | Not Available | Positive | 312756 - 314060 | 48974.2 |
| type i restriction endonuclease subunit r | DIZ31_01560 | Not Available | Positive | 314155 - 317418 | 124940.0 |
| endoribonuclease syme | DIZ31_01565 | Not Available | Positive | 317633 - 317971 | 12383.9 |
| duf1127 domain-containing protein | DIZ31_01570 | Not Available | Negative | 318014 - 318178 | 6864.37 |
| plp-dependent aminotransferase family protein | DIZ31_01575 | Not Available | Positive | 318355 - 319767 | 53019.7 |
| rpn family recombination-promoting nuclease/putative transposase | DIZ31_01580 | Not Available | Negative | 320010 - 320966 | 37205.9 |
| hypothetical protein | DIZ31_01585 | Not Available | Negative | 320963 - 321175 | 7704.21 |
| hypothetical protein | DIZ31_01590 | Not Available | Positive | 321302 - 321487 | 7002.86 |
| mfs transporter | DIZ31_01595 | Not Available | Positive | 321433 - 322665 | 44583.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





