Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2541 domain-containing protein | DIZ31_01200 | Not Available | Positive | 244043 - 244447 | 14534.5 |
| acidic protein msyb | DIZ31_01205 | Not Available | Positive | 244473 - 245186 | 26694.6 |
| acetate uptake transporter | DIZ31_01210 | Not Available | Positive | 245335 - 245901 | 20086.2 |
| molybdopterin adenylyltransferase | DIZ31_01215 | Not Available | Negative | 245936 - 246523 | 21237.6 |
| transaldolase b | DIZ31_01220 | Not Available | Negative | 246638 - 247591 | 35207.1 |
| sodium:alanine symporter family protein | DIZ31_01225 | Not Available | Positive | 247870 - 249300 | 51626.9 |
| peroxide stress protein yaaa | DIZ31_01230 | Not Available | Positive | 249370 - 250146 | 29587.5 |
| duf2502 domain-containing protein | DIZ31_01235 | Not Available | Negative | 250186 - 250482 | 11586.7 |
| threonine synthase | DIZ31_01240 | Not Available | Negative | 250696 - 251982 | 47028.4 |
| homoserine kinase | DIZ31_01245 | Not Available | Negative | 251983 - 252915 | 33583.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





