Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp25 | DIZ31_05420 | Not Available | Positive | 1074404 - 1074730 | 12677.2 |
| Hypothetical protein | DIZ31_05425 | Not Available | Positive | 1074730 - 1075041 | 11989.4 |
| Gp1 | DIZ31_05430 | Not Available | Positive | 1075041 - 1075586 | 20072.9 |
| Putative portal protein | DIZ31_05435 | Not Available | Positive | 1075583 - 1077178 | 58868.8 |
| Putative portal protein | DIZ31_05440 | Not Available | Positive | 1077178 - 1078674 | 55781.2 |
| Virion morphogenesis | DIZ31_05445 | Not Available | Positive | 1078655 - 1079476 | 31180.0 |
| Gp5, phage virion morphogenesis protein | DIZ31_05450 | Not Available | Positive | 1079479 - 1079937 | 16535.6 |
| Gp6 | DIZ31_05455 | Not Available | Positive | 1080152 - 1081267 | 40470.5 |
| Major capsid protein | DIZ31_05460 | Not Available | Positive | 1081282 - 1082235 | 34453.5 |
| Gp35 | DIZ31_05465 | Not Available | Positive | 1082245 - 1082583 | 10859.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





