Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa dehydrogenase | DIZ31_01045 | Not Available | Positive | 209784 - 210926 | 42547.8 |
| l-carnitine coa-transferase | DIZ31_01050 | Not Available | Positive | 211055 - 212272 | 45075.2 |
| crotonobetaine/carnitine-coa ligase | DIZ31_01055 | Not Available | Positive | 212345 - 213898 | 58668.6 |
| carnitinyl-coa dehydratase | DIZ31_01060 | Not Available | Positive | 214007 - 214792 | 28177.8 |
| carnitine operon protein caie | DIZ31_01065 | Not Available | Positive | 214798 - 215388 | 21161.6 |
| transcriptional activatory protein caif | DIZ31_01070 | Not Available | Negative | 215507 - 215902 | 15423.0 |
| hypothetical protein | DIZ31_01075 | Not Available | Positive | 215937 - 216155 | 8180.97 |
| carbamoyl-phosphate synthase large chain | DIZ31_01080 | Not Available | Negative | 216163 - 219384 | 117907.0 |
| carbamoyl-phosphate synthase small subunit | DIZ31_01085 | Not Available | Negative | 219402 - 220550 | 41417.4 |
| hypothetical protein | DIZ31_01090 | Not Available | Negative | 220703 - 220900 | 7526.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





