Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-associated protein rapa | DIZ31_00945 | Not Available | Positive | 187700 - 190606 | 109776.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | DIZ31_00950 | Not Available | Positive | 190618 - 191280 | 24977.2 |
| co-chaperone djla | DIZ31_00955 | Not Available | Negative | 191427 - 192242 | 30597.2 |
| lps-assembly protein lptd | DIZ31_00960 | Not Available | Positive | 192497 - 194851 | 89657.9 |
| chaperone sura | DIZ31_00965 | Not Available | Positive | 194904 - 196190 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DIZ31_00970 | Not Available | Positive | 196190 - 197179 | 35251.1 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | DIZ31_00975 | Not Available | Positive | 197176 - 197997 | 30291.9 |
| co2+/mg2+ efflux protein apag | DIZ31_00980 | Not Available | Positive | 198000 - 198377 | 13867.6 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | DIZ31_00985 | Not Available | Positive | 198384 - 199232 | 31569.7 |
| plasmid maintenance protein ccdb | DIZ31_00990 | Not Available | Negative | 199259 - 199543 | 10693.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





