Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein a | DIZ31_00890 | Not Available | Positive | 175658 - 176092 | 16067.3 |
| hypothetical protein | DIZ31_00900 | Not Available | Negative | 176275 - 176454 | 7039.42 |
| dipeptide/tripeptide permease dtpb | DIZ31_00905 | Not Available | Positive | 176409 - 177878 | 53541.4 |
| ribosomal rna small subunit methyltransferase j | DIZ31_00910 | Not Available | Negative | 177927 - 178679 | 26878.7 |
| oligopeptidase a | DIZ31_00915 | Not Available | Negative | 178687 - 179874 | 45567.1 |
| arabinose operon transcriptional regulator arac | DIZ31_00920 | Not Available | Negative | 179902 - 180747 | 32183.3 |
| ribulokinase | DIZ31_00925 | Not Available | Positive | 181086 - 182786 | 61265.8 |
| l-arabinose isomerase | DIZ31_00930 | Not Available | Positive | 182797 - 184299 | 56106.2 |
| l-ribulose-5-phosphate 4-epimerase | DIZ31_00935 | Not Available | Positive | 184414 - 185109 | 25458.3 |
| dna polymerase ii | DIZ31_00940 | Not Available | Positive | 185184 - 187535 | 90128.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





