Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter, nickel/metallophore periplasmic binding protein | DIZ31_00785 | Not Available | Positive | 153910 - 155484 | 58814.2 |
| nickel abc transporter permease subunit nikb | DIZ31_00790 | Not Available | Positive | 155484 - 156428 | 35250.3 |
| nickel abc transporter permease subunit nikc | DIZ31_00795 | Not Available | Positive | 156425 - 157258 | 30391.9 |
| nickel import atp-binding protein nikd | DIZ31_00800 | Not Available | Positive | 157258 - 158022 | 26814.1 |
| nickel import atp-binding protein nike | DIZ31_00805 | Not Available | Positive | 158019 - 158825 | 29726.5 |
| nickel-responsive transcriptional regulator nikr | DIZ31_00810 | Not Available | Positive | 158831 - 159232 | 15094.7 |
| gntr family transcriptional regulator | DIZ31_00815 | Not Available | Positive | 159431 - 160177 | 28407.3 |
| pts sugar transporter subunit iia | DIZ31_00820 | Not Available | Positive | 160202 - 160675 | 17409.3 |
| pts sugar transporter subunit iib | DIZ31_00825 | Not Available | Positive | 160672 - 160953 | 9823.0 |
| pts galactitol transporter subunit iic | DIZ31_00830 | Not Available | Positive | 161030 - 162388 | 48803.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





