Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | DIZ31_00685 | Not Available | Negative | 135945 - 137054 | 39437.0 |
| aspartate 1-decarboxylase autocleavage activator panm | DIZ31_00690 | Not Available | Positive | 137477 - 137860 | 14573.4 |
| gnat family n-acetyltransferase | DIZ31_00695 | Not Available | Negative | 137857 - 138384 | 19674.7 |
| duf1778 domain-containing protein | DIZ31_00700 | Not Available | Negative | 138391 - 138657 | 9929.96 |
| branched chain amino acid abc transporter substrate-binding protein | DIZ31_00705 | Not Available | Negative | 138806 - 139909 | 39064.5 |
| rna polymerase sigma factor rpoh | DIZ31_00710 | Not Available | Negative | 140180 - 141034 | 32470.6 |
| cell division protein ftsx | DIZ31_00715 | Not Available | Negative | 141279 - 142337 | 38485.8 |
| cell division atp-binding protein ftse | DIZ31_00720 | Not Available | Negative | 142330 - 142998 | 24440.8 |
| signal recognition particle-docking protein ftsy | DIZ31_00725 | Not Available | Negative | 143001 - 144497 | 54675.5 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | DIZ31_00730 | Not Available | Positive | 144647 - 145243 | 21692.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





