Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | DIZ31_05370 | Not Available | Negative | 1069156 - 1069464 | 11011.3 |
| Hypothetical protein | DIZ31_05375 | Not Available | Negative | 1069517 - 1069705 | 7058.41 |
| Hypothetical protein | DIZ31_05380 | Not Available | Positive | 1069799 - 1070155 | 13202.9 |
| Dna adenine methylase | DIZ31_05385 | Not Available | Negative | 1070272 - 1071036 | 29477.8 |
| hypothetical protein | DIZ31_05390 | Not Available | Negative | 1071227 - 1071442 | 8220.78 |
| Hypothetical protein | DIZ31_05395 | Not Available | Positive | 1071441 - 1071845 | 15431.9 |
| hypothetical protein | DIZ31_05400 | Not Available | Negative | 1071821 - 1072549 | 27067.6 |
| Gp51 | DIZ31_05405 | Not Available | Positive | 1072680 - 1073030 | 12772.4 |
| Endolysin | DIZ31_05410 | Not Available | Positive | 1073033 - 1073773 | 27743.3 |
| Hypothetical protein | DIZ31_05415 | Not Available | Positive | 1073757 - 1074407 | 24211.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





