Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_00535 | Not Available | Negative | 100625 - 101230 | 23592.4 |
| hypothetical protein | DIZ31_00540 | Not Available | Negative | 101233 - 102000 | 29489.5 |
| phosphate abc transporter substrate-binding protein | DIZ31_00545 | Not Available | Negative | 102103 - 103620 | 56799.9 |
| glycogen phosphorylase | DIZ31_00550 | Not Available | Negative | 103736 - 106183 | 93232.8 |
| glycogen synthase | DIZ31_00555 | Not Available | Negative | 106202 - 107635 | 52825.4 |
| glucose-1-phosphate adenylyltransferase | DIZ31_00560 | Not Available | Negative | 107635 - 108930 | 48670.4 |
| glycogen debranching enzyme | DIZ31_00565 | Not Available | Negative | 108948 - 110921 | 73728.8 |
| 1,4-alpha-glucan branching enzyme | DIZ31_00570 | Not Available | Negative | 110918 - 113104 | 84425.5 |
| aspartate-semialdehyde dehydrogenase | DIZ31_00575 | Not Available | Negative | 113377 - 114480 | 40033.2 |
| marc family transporter | DIZ31_00580 | Not Available | Positive | 114672 - 115265 | 21521.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





