Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated heat shock protein hsp15 | DIZ31_00380 | Not Available | Positive | 68522 - 68923 | 15524.8 |
| redox-regulated molecular chaperone hsp33 | DIZ31_00385 | Not Available | Positive | 68948 - 69826 | 32536.3 |
| transposase | DIZ31_00390 | Not Available | Negative | 69949 - 71157 | 45630.9 |
| duf4153 domain-containing protein | DIZ31_00400 | Not Available | Negative | 71460 - 73184 | 64547.0 |
| hypothetical protein | DIZ31_00405 | Not Available | Negative | 73259 - 73390 | 4693.67 |
| phosphoenolpyruvate carboxykinase (atp) | DIZ31_00410 | Not Available | Positive | 73562 - 75184 | 59646.7 |
| two-component system sensor histidine kinase envz | DIZ31_00415 | Not Available | Negative | 75261 - 76613 | 50365.1 |
| two-component system response regulator ompr | DIZ31_00420 | Not Available | Negative | 76610 - 77329 | 27345.3 |
| hypothetical protein | DIZ31_00425 | Not Available | Negative | 77419 - 77604 | 7099.83 |
| transcription elongation factor greb | DIZ31_00430 | Not Available | Positive | 77521 - 78033 | 19958.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





