Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 58343 - 58719 | Not Available |
| dna transporter hofq | DIZ31_00335 | Not Available | Negative | 58639 - 59877 | 44814.0 |
| duf2531 domain-containing protein | DIZ31_00340 | Not Available | Negative | 59789 - 60193 | 15080.0 |
| dna utilization protein hofo | DIZ31_00345 | Not Available | Negative | 60183 - 60623 | 16774.0 |
| dna utilization protein hofn | DIZ31_00350 | Not Available | Negative | 60607 - 61146 | 20923.3 |
| dna utilization protein hofm | DIZ31_00355 | Not Available | Negative | 61146 - 61925 | 29108.0 |
| carboxypeptidase/penicillin-binding protein 1a | DIZ31_00360 | Not Available | Positive | 62045 - 64597 | 93679.4 |
| adp compounds hydrolase nude | DIZ31_00365 | Not Available | Negative | 64763 - 65323 | 21094.3 |
| intracellular growth attenuator protein igaa | DIZ31_00370 | Not Available | Positive | 65643 - 67778 | 79431.5 |
| gmp/imp nucleotidase | DIZ31_00375 | Not Available | Positive | 67843 - 68511 | 25382.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





