Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_00290 | Not Available | Negative | 50741 - 51646 | 33551.5 |
| hypothetical protein | DIZ31_00295 | Not Available | Positive | 51664 - 51852 | 7625.66 |
| tryptophan--trna ligase | DIZ31_00300 | Not Available | Negative | 51808 - 52812 | 37425.9 |
| phosphoglycolate phosphatase | DIZ31_00305 | Not Available | Negative | 52805 - 53563 | 27389.8 |
| ribulose-phosphate 3-epimerase | DIZ31_00310 | Not Available | Negative | 53556 - 54233 | 24555.7 |
| adenine-specific dna-methyltransferase | DIZ31_00315 | Not Available | Negative | 54251 - 55087 | 32087.2 |
| cell division protein damx | DIZ31_00320 | Not Available | Negative | 55194 - 56480 | 46034.1 |
| 3-dehydroquinate synthase | DIZ31_00325 | Not Available | Negative | 56572 - 57660 | 38900.3 |
| Ncrna_class:other | Not Available | Not Available | Positive | 58166 - 58349 | Not Available |
| shikimate kinase | DIZ31_00330 | Not Available | Negative | 57717 - 58238 | 19539.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





