Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite transporter nirc | DIZ31_00240 | Not Available | Positive | 41511 - 42317 | 28531.1 |
| siroheme synthase | DIZ31_00245 | Not Available | Positive | 42336 - 43709 | 49980.4 |
| duf4223 domain-containing protein | DIZ31_00250 | Not Available | Positive | 43961 - 44128 | 5819.16 |
| aminotransferase | DIZ31_00255 | Not Available | Negative | 44236 - 45321 | 38600.9 |
| hypothetical protein | DIZ31_00260 | Not Available | Negative | 45333 - 46637 | 46493.3 |
| duf2620 domain-containing protein | DIZ31_00265 | Not Available | Negative | 46649 - 47002 | 12479.5 |
| phosphotriesterase-related protein | DIZ31_00270 | Not Available | Negative | 47013 - 47891 | 32819.2 |
| phosphopentomutase | DIZ31_00275 | Not Available | Negative | 47888 - 49114 | 44528.1 |
| yhfx family plp-dependent enzyme | DIZ31_00280 | Not Available | Negative | 49115 - 50278 | 42509.8 |
| prd domain-containing protein | DIZ31_00285 | Not Available | Negative | 50362 - 50724 | 13515.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





