Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_18425 | Not Available | Negative | 3620107 - 3620499 | 14654.7 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | DIZ31_18430 | Not Available | Negative | 3620496 - 3621329 | 30932.8 |
| peptide chain release factor 1 | DIZ31_18435 | Not Available | Negative | 3621329 - 3622411 | 40519.6 |
| glutamyl-trna reductase | DIZ31_18440 | Not Available | Negative | 3622453 - 3623709 | 46333.5 |
| lipoprotein localization protein lolb | DIZ31_18445 | Not Available | Positive | 3623923 - 3624546 | 23590.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DIZ31_18450 | Not Available | Positive | 3624546 - 3625397 | 30957.2 |
| ribose-phosphate pyrophosphokinase | DIZ31_18460 | Not Available | Positive | 3625548 - 3626495 | 34176.3 |
| sodium-independent anion transporter | DIZ31_18470 | Not Available | Positive | 3626620 - 3628299 | 59446.9 |
| duf2583 domain-containing protein | DIZ31_18475 | Not Available | Negative | 3628354 - 3628632 | 10486.9 |
| aminoacyl-trna hydrolase | DIZ31_18480 | Not Available | Positive | 3628910 - 3629494 | 21113.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





