Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_18220 | Not Available | Positive | 3584186 - 3584251 | 2669.4 |
| holliday junction branch migration protein ruva | DIZ31_18225 | Not Available | Positive | 3584390 - 3585001 | 22087.0 |
| holliday junction branch migration dna helicase ruvb | DIZ31_18230 | Not Available | Positive | 3585010 - 3586020 | 37166.0 |
| glycosyl transferase family 1 | DIZ31_18235 | Not Available | Positive | 3586205 - 3588128 | 74657.5 |
| hypothetical protein | DIZ31_18240 | Not Available | Positive | 3588231 - 3589259 | 38714.9 |
| hypothetical protein | DIZ31_18245 | Not Available | Positive | 3589265 - 3590260 | 38000.1 |
| capsular biosynthesis protein | DIZ31_18250 | Not Available | Negative | 3590422 - 3591660 | 48811.1 |
| beta-3-deoxy-d-manno-oct-2-ulosonic acid transferase | DIZ31_18255 | Not Available | Negative | 3591695 - 3593722 | 75598.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DIZ31_18260 | Not Available | Negative | 3593719 - 3594459 | 27160.7 |
| polysialic acid transporter | DIZ31_18265 | Not Available | Negative | 3594469 - 3596148 | 60517.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





