Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | DIZ31_17960 | Not Available | Negative | 3532614 - 3533177 | 20762.5 |
| thiol:disulfide interchange protein dsbg | DIZ31_17965 | Not Available | Positive | 3533549 - 3534295 | 27568.6 |
| lysr family transcriptional regulator | DIZ31_17970 | Not Available | Positive | 3534500 - 3535402 | 34247.7 |
| phosphoadenosine phosphosulfate reductase | DIZ31_17975 | Not Available | Positive | 3535549 - 3536769 | 47857.2 |
| hypothetical protein | DIZ31_17980 | Not Available | Positive | 3536742 - 3537371 | 23896.7 |
| pyridoxal phosphate-dependent aminotransferase | DIZ31_17985 | Not Available | Negative | 3537372 - 3538532 | 43076.5 |
| oxidoreductase | DIZ31_17990 | Not Available | Positive | 3538641 - 3539729 | 39240.9 |
| duf466 domain-containing protein | DIZ31_17995 | Not Available | Negative | 3539739 - 3539936 | 7467.89 |
| carbon starvation protein csta | DIZ31_18000 | Not Available | Negative | 3540049 - 3542154 | 75121.7 |
| proofreading thioesterase enth | DIZ31_18005 | Not Available | Negative | 3542335 - 3542748 | 14971.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





