Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit beta | DIZ31_17910 | Not Available | Positive | 3523040 - 3523948 | 33111.6 |
| citrate lyase subunit alpha | DIZ31_17915 | Not Available | Positive | 3523959 - 3525491 | 55171.9 |
| apo-citrate lyase phosphoribosyl-dephospho-coa transferase | DIZ31_17920 | Not Available | Positive | 3525495 - 3526046 | 20229.4 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | DIZ31_17925 | Not Available | Positive | 3526021 - 3526899 | 31611.2 |
| anion permease | DIZ31_17930 | Not Available | Positive | 3526950 - 3528413 | 53152.7 |
| ribonuclease i | DIZ31_17935 | Not Available | Positive | 3528527 - 3529333 | 29605.1 |
| hypothetical protein | DIZ31_17940 | Not Available | Negative | 3529390 - 3529575 | 7044.48 |
| nucleoside diphosphate kinase regulator | DIZ31_17945 | Not Available | Positive | 3529563 - 3529973 | 14928.0 |
| universal stress protein uspg | DIZ31_17950 | Not Available | Positive | 3530329 - 3530757 | 16008.2 |
| alkyl hydroperoxide reductase subunit f | DIZ31_17955 | Not Available | Negative | 3530878 - 3532443 | 56180.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





