Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | DIZ31_17750 | Not Available | Negative | 3494459 - 3495007 | 20582.1 |
| tvp38/tmem64 family protein | DIZ31_17755 | Not Available | Negative | 3495007 - 3495714 | 26126.8 |
| protein ydjy | DIZ31_17760 | Not Available | Negative | 3495728 - 3496405 | 24156.7 |
| tvp38/tmem64 family protein | DIZ31_17765 | Not Available | Negative | 3496410 - 3497120 | 26068.7 |
| exodeoxyribonuclease iii | DIZ31_17770 | Not Available | Negative | 3497287 - 3498093 | 30968.9 |
| aspartate aminotransferase family protein | DIZ31_17780 | Not Available | Positive | 3498539 - 3499759 | 43620.7 |
| arginine n-succinyltransferase | DIZ31_17785 | Not Available | Positive | 3499756 - 3500790 | 38486.0 |
| succinylglutamate-semialdehyde dehydrogenase | DIZ31_17790 | Not Available | Positive | 3500787 - 3502265 | 53182.5 |
| n-succinylarginine dihydrolase | DIZ31_17795 | Not Available | Positive | 3502262 - 3503605 | 49321.5 |
| succinylglutamate desuccinylase | DIZ31_17800 | Not Available | Positive | 3503598 - 3504566 | 35857.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





