Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein carrier protein lola | DIZ31_17700 | Not Available | Positive | 3484660 - 3485271 | 22498.2 |
| replication-associated recombination protein a | DIZ31_17705 | Not Available | Positive | 3485282 - 3486625 | 49656.9 |
| serine--trna ligase | DIZ31_17710 | Not Available | Positive | 3486716 - 3488008 | 48416.8 |
| duf1496 domain-containing protein | DIZ31_17715 | Not Available | Positive | 3488387 - 3488659 | 9924.91 |
| pyrimidine (deoxy)nucleoside triphosphate diphosphatase | DIZ31_17720 | Not Available | Negative | 3488625 - 3489032 | 15006.8 |
| cdp-alcohol phosphatidyltransferase family protein | DIZ31_17725 | Not Available | Positive | 3489119 - 3489739 | 22597.9 |
| sulfurtransferase | DIZ31_17730 | Not Available | Negative | 3489748 - 3491055 | 48282.9 |
| sulfate abc transporter atp-binding protein | DIZ31_17735 | Not Available | Negative | 3491122 - 3491775 | 24027.1 |
| thiamine abc transporter permease | DIZ31_17740 | Not Available | Negative | 3491775 - 3493310 | 56074.9 |
| abc transporter substrate-binding protein | DIZ31_17745 | Not Available | Negative | 3493283 - 3494449 | 42964.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





