Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | DIZ31_17540 | Not Available | Positive | 3447406 - 3448080 | 24189.7 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | DIZ31_17545 | Not Available | Positive | 3448085 - 3449215 | 41945.4 |
| lipid iii flippase wzxe | DIZ31_17550 | Not Available | Positive | 3449217 - 3450467 | 44962.3 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | DIZ31_17555 | Not Available | Positive | 3450464 - 3451543 | 40646.9 |
| o-antigen assembly polymerase | DIZ31_17560 | Not Available | Positive | 3451540 - 3452892 | 51496.1 |
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | DIZ31_17565 | Not Available | Positive | 3452895 - 3453635 | 27963.8 |
| amino acid permease | DIZ31_17570 | Not Available | Positive | 3453826 - 3454719 | 32218.1 |
| low-specificity l-threonine aldolase | DIZ31_17580 | Not Available | Negative | 3455546 - 3456547 | 36514.9 |
| ubiquinone-dependent pyruvate dehydrogenase | DIZ31_17585 | Not Available | Negative | 3456584 - 3458302 | 62085.1 |
| nadh oxidoreductase | DIZ31_17590 | Not Available | Negative | 3458435 - 3459403 | 35819.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





