Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase isozyme 2 small subunit | DIZ31_17440 | Not Available | Positive | 3426016 - 3426279 | 9703.74 |
| branched chain amino acid aminotransferase | DIZ31_17445 | Not Available | Positive | 3426299 - 3427228 | 34095.6 |
| dihydroxy-acid dehydratase | DIZ31_17450 | Not Available | Positive | 3427293 - 3429143 | 65547.4 |
| threonine ammonia-lyase, biosynthetic | DIZ31_17455 | Not Available | Positive | 3429146 - 3430690 | 56187.4 |
| hth-type transcriptional activator ilvy | DIZ31_17460 | Not Available | Negative | 3430687 - 3431577 | 33050.1 |
| ketol-acid reductoisomerase | DIZ31_17465 | Not Available | Positive | 3431727 - 3433202 | 54058.1 |
| peptidyl-prolyl cis-trans isomerase | DIZ31_17470 | Not Available | Negative | 3433248 - 3433529 | 10232.6 |
| dna helicase rep | DIZ31_17475 | Not Available | Positive | 3433616 - 3435637 | 77100.7 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | DIZ31_17480 | Not Available | Negative | 3435684 - 3437168 | 54999.6 |
| addiction module toxin rele | DIZ31_17485 | Not Available | Negative | 3437174 - 3437296 | 4672.46 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





