Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress response translation initiation inhibitor ycih | DIZ31_17380 | Not Available | Negative | 3419199 - 3419525 | 11429.0 |
| orotidine-5'-phosphate decarboxylase | DIZ31_17385 | Not Available | Negative | 3419525 - 3420262 | 26203.6 |
| Trna-asp | Not Available | Not Available | Positive | 3420685 - 3420761 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 3420770 - 3420845 | Not Available |
| transcriptional regulator | DIZ31_17405 | Not Available | Negative | 3420941 - 3421780 | 31792.1 |
| duf413 domain-containing protein | DIZ31_17410 | Not Available | Positive | 3421899 - 3422237 | 13134.2 |
| atp-dependent protease | DIZ31_17415 | Not Available | Negative | 3422262 - 3423782 | 55268.7 |
| ilvgmeda operon leader peptide | DIZ31_17425 | Not Available | Positive | 3424135 - 3424233 | 3231.32 |
| hypothetical protein | DIZ31_17430 | Not Available | Positive | 3424320 - 3424370 | 1910.25 |
| acetolactate synthase 2 catalytic subunit | DIZ31_17435 | Not Available | Positive | 3424373 - 3426019 | 59180.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





