Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanate mfs transporter | DIZ31_17160 | Not Available | Positive | 3381489 - 3382670 | 41250.8 |
| duf488 domain-containing protein | DIZ31_17165 | Not Available | Positive | 3382725 - 3383072 | 13355.9 |
| duf333 domain-containing protein | DIZ31_17170 | Not Available | Negative | 3383094 - 3383348 | 8942.87 |
| ggdef domain-containing protein | DIZ31_17175 | Not Available | Positive | 3383531 - 3384556 | 38541.8 |
| hypothetical protein | DIZ31_17180 | Not Available | Positive | 3384589 - 3384687 | 3458.45 |
| hypothetical protein | DIZ31_17185 | Not Available | Positive | 3384690 - 3384764 | 2691.57 |
| glsb/yeaq/ymge family stress response membrane protein | DIZ31_17190 | Not Available | Negative | 3384823 - 3385071 | 8671.14 |
| duf1869 domain-containing protein | DIZ31_17195 | Not Available | Negative | 3385219 - 3385401 | 6608.63 |
| duf1971 domain-containing protein | DIZ31_17200 | Not Available | Negative | 3385405 - 3385764 | 13612.2 |
| oxidoreductase | DIZ31_17210 | Not Available | Negative | 3386116 - 3386969 | 31247.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





