Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hok/gef family protein | DIZ31_24350 | Not Available | Positive | 4625269 - 4625409 | 5226.58 |
| Head completion/stabilization protein | DIZ31_25205 | Not Available | Positive | 4777046 - 4777540 | 18345.5 |
| Tail protein x | DIZ31_25210 | Not Available | Positive | 4777540 - 4777740 | 7479.97 |
| Holin family protein | DIZ31_25215 | Not Available | Positive | 4777743 - 4778066 | 11447.0 |
| M15 family metallopeptidase | DIZ31_25220 | Not Available | Positive | 4778063 - 4778455 | 14703.4 |
| Duf2570 domain-containing protein | DIZ31_25225 | Not Available | Positive | 4778452 - 4778847 | 14535.1 |
| Hypothetical protein | DIZ31_25230 | Not Available | Positive | 4778986 - 4780303 | 47585.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4 - 119 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 16 - 1569 | Not Available |
| type ii secretion system protein gspc | DIZ31_00005 | Not Available | Positive | 82 - 897 | 30085.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





