Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DIZ31_16960 | Not Available | Negative | 3338751 - 3339686 | 33274.1 |
| carbohydrate kinase | DIZ31_16965 | Not Available | Negative | 3339790 - 3341310 | 54545.1 |
| sugar-binding transcriptional regulator | DIZ31_16970 | Not Available | Negative | 3341661 - 3342611 | 34452.5 |
| transketolase | DIZ31_16975 | Not Available | Positive | 3342974 - 3343804 | 30324.0 |
| transketolase | DIZ31_16980 | Not Available | Positive | 3343797 - 3344732 | 32754.4 |
| enterobactin synthase subunit entd | DIZ31_16985 | Not Available | Negative | 3344734 - 3345393 | 24249.0 |
| tonb-dependent siderophore receptor | DIZ31_16990 | Not Available | Negative | 3345568 - 3347808 | 82066.3 |
| enterochelin esterase | DIZ31_16995 | Not Available | Positive | 3348051 - 3348597 | 21203.9 |
| glutamate dehydrogenase | DIZ31_17000 | Not Available | Positive | 3348606 - 3349949 | 48572.2 |
| dna topoisomerase iii | DIZ31_17005 | Not Available | Negative | 3350026 - 3351981 | 73264.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





