Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_16690 | Not Available | Negative | 3281813 - 3282451 | 23770.2 |
| hypothetical protein | DIZ31_16695 | Not Available | Negative | 3282566 - 3282808 | 7386.46 |
| glucose-6-phosphate isomerase | DIZ31_16700 | Not Available | Negative | 3283306 - 3284955 | 61547.1 |
| lysine-sensitive aspartokinase 3 | DIZ31_16710 | Not Available | Positive | 3285480 - 3286829 | 48580.6 |
| duf3811 domain-containing protein | DIZ31_16715 | Not Available | Positive | 3287082 - 3287354 | 10546.7 |
| 23s rrna pseudouridine(2604) synthase rluf | DIZ31_16720 | Not Available | Negative | 3287355 - 3288227 | 32424.4 |
| sugar-binding transcriptional regulator | DIZ31_16725 | Not Available | Positive | 3288575 - 3289522 | 34904.8 |
| sdr family nad(p)-dependent oxidoreductase | DIZ31_16730 | Not Available | Positive | 3289592 - 3290398 | 29026.6 |
| pts sorbose transporter subunit iia | DIZ31_16735 | Not Available | Positive | 3290408 - 3290815 | 14855.0 |
| pts system mannose/fructose/n-acetylgalactosamine-transporter subunit iib | DIZ31_16740 | Not Available | Positive | 3290815 - 3291309 | 18405.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





