Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_16580 | Not Available | Positive | 3260536 - 3260646 | 3618.45 |
| oxygen-independent coproporphyrinogen iii oxidase | DIZ31_16585 | Not Available | Negative | 3260879 - 3262252 | 52707.9 |
| der gtpase-activating protein yihi | DIZ31_16590 | Not Available | Negative | 3262441 - 3262974 | 20046.5 |
| clbs/dfsb family four-helix bundle protein | DIZ31_16595 | Not Available | Positive | 3263032 - 3263550 | 19590.5 |
| isl3-like element isec53 family transposase | DIZ31_16600 | Not Available | Positive | 3263569 - 3264789 | 47011.0 |
| hypothetical protein | DIZ31_16610 | Not Available | Positive | 3265278 - 3265673 | 14740.0 |
| hypothetical protein | DIZ31_16615 | Not Available | Negative | 3265955 - 3266104 | 5788.11 |
| n-acetylneuraminic acid outer membrane channel protein nanc | DIZ31_16620 | Not Available | Positive | 3266471 - 3267187 | 27889.4 |
| n-acetylneuraminate epimerase | DIZ31_16625 | Not Available | Positive | 3267207 - 3268313 | 39575.2 |
| sialate o-acetylesterase | DIZ31_16630 | Not Available | Positive | 3268377 - 3269357 | 36813.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





