Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber protein | DIZ31_24300 | Not Available | Negative | 4617106 - 4617245 | 4807.65 |
| Recombinase family protein | DIZ31_24305 | Not Available | Positive | 4617296 - 4617895 | 22493.2 |
| Tail protein | DIZ31_24310 | Not Available | Negative | 4617924 - 4618418 | 18611.2 |
| Tail tape measure protein | DIZ31_24315 | Not Available | Negative | 4618425 - 4621232 | 100239.0 |
| Gpe family tail protein | DIZ31_24320 | Not Available | Negative | 4621219 - 4621455 | 8897.49 |
| Tail e family protein | DIZ31_24325 | Not Available | Negative | 4621383 - 4621757 | 13496.1 |
| Major tail tube protein | DIZ31_24330 | Not Available | Negative | 4621813 - 4622325 | 18795.4 |
| Tail sheath family protein | DIZ31_24335 | Not Available | Negative | 4622325 - 4623509 | 43462.4 |
| Bacteriop2 gpd protein | DIZ31_24340 | Not Available | Positive | 4623667 - 4624776 | 41194.8 |
| Ogr/delta-like zinc finger family protein | DIZ31_24345 | Not Available | Positive | 4624817 - 4625077 | 9654.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





