Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DIZ31_16480 | Not Available | Negative | 3240680 - 3240970 | 10847.1 |
| toxin higb-2 | DIZ31_16485 | Not Available | Negative | 3240971 - 3241282 | 12203.9 |
| alpha/beta hydrolase | DIZ31_16490 | Not Available | Positive | 3241511 - 3242419 | 33608.2 |
| gnat family n-acetyltransferase | DIZ31_16495 | Not Available | Negative | 3242483 - 3243472 | 37096.5 |
| d-aminoacyl-trna deacylase | DIZ31_16500 | Not Available | Negative | 3243469 - 3243906 | 15937.0 |
| virulence factor brkb family protein | DIZ31_16505 | Not Available | Negative | 3243903 - 3244775 | 32840.7 |
| glucose-1-phosphatase | DIZ31_16510 | Not Available | Negative | 3244769 - 3245368 | 22817.2 |
| aldose 1-epimerase | DIZ31_16515 | Not Available | Negative | 3245509 - 3246396 | 33038.2 |
| mfs transporter | DIZ31_16520 | Not Available | Negative | 3246386 - 3247735 | 49211.9 |
| mfs transporter | DIZ31_16525 | Not Available | Negative | 3247834 - 3249267 | 50742.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





