Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DIZ31_16370 | Not Available | Negative | 3224889 - 3225599 | 25780.8 |
| cell division protein ftsb | DIZ31_16375 | Not Available | Negative | 3225618 - 3225929 | 11621.8 |
| duf3561 domain-containing protein | DIZ31_16380 | Not Available | Negative | 3226122 - 3226445 | 11863.8 |
| adenylyl-sulfate kinase | DIZ31_16385 | Not Available | Negative | 3226494 - 3227099 | 22351.7 |
| sulfate adenylyltransferase subunit cysn | DIZ31_16390 | Not Available | Negative | 3227099 - 3228526 | 52589.6 |
| sulfate adenylyltransferase subunit 2 | DIZ31_16395 | Not Available | Negative | 3228528 - 3229436 | 35205.3 |
| aminopeptidase | DIZ31_16400 | Not Available | Positive | 3229688 - 3230725 | 37917.3 |
| hok/gef family protein | DIZ31_16405 | Not Available | Negative | 3230851 - 3231003 | 5559.11 |
| hypothetical protein | DIZ31_16415 | Not Available | Negative | 3231269 - 3231457 | 7086.28 |
| hypothetical protein | DIZ31_16420 | Not Available | Positive | 3231459 - 3231980 | 19055.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





