Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | DIZ31_23205 | Not Available | Positive | 4452447 - 4454297 | 65877.1 |
| Tail completion protein | DIZ31_23210 | Not Available | Positive | 4454321 - 4454788 | 17730.8 |
| Tail protein | DIZ31_23215 | Not Available | Positive | 4454781 - 4455416 | 24747.4 |
| Baseplate assembly protein v | DIZ31_23220 | Not Available | Positive | 4455413 - 4455994 | 20206.0 |
| Lysozyme family baseplate assembly protein | DIZ31_23225 | Not Available | Positive | 4455991 - 4456341 | 12905.7 |
| Baseplate j/gp47 family protein | DIZ31_23230 | Not Available | Positive | 4456345 - 4457241 | 31895.8 |
| Tail protein i | DIZ31_23235 | Not Available | Positive | 4457234 - 4457764 | 19933.7 |
| Tail fiber protein | DIZ31_23240 | Not Available | Positive | 4457767 - 4459752 | 69349.2 |
| Tail fiber assembly protein | DIZ31_23245 | Not Available | Positive | 4459755 - 4460288 | 20600.4 |
| Tail fiber assembly protein | DIZ31_23250 | Not Available | Negative | 4460317 - 4460792 | 18114.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





