Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | DIZ31_16010 | Not Available | Positive | 3142762 - 3142893 | 5002.24 |
| tagaturonate reductase | DIZ31_16015 | Not Available | Positive | 3143038 - 3144489 | 54807.4 |
| hypothetical protein | DIZ31_16020 | Not Available | Negative | 3144536 - 3144736 | 8079.01 |
| hypothetical protein | DIZ31_16025 | Not Available | Positive | 3144686 - 3145600 | 34839.0 |
| trans-aconitate 2-methyltransferase | DIZ31_16030 | Not Available | Negative | 3145604 - 3146362 | 29049.5 |
| transcriptional regulator | DIZ31_16035 | Not Available | Positive | 3146670 - 3146936 | 9987.87 |
| type ii toxin-antitoxin system hipa family toxin | DIZ31_16040 | Not Available | Positive | 3146936 - 3148258 | 49332.7 |
| hypothetical protein | DIZ31_16045 | Not Available | Positive | 3148298 - 3148477 | 6895.46 |
| amp nucleosidase | DIZ31_16055 | Not Available | Negative | 3149348 - 3150802 | 54011.9 |
| shikimate transporter | DIZ31_16060 | Not Available | Negative | 3150904 - 3152220 | 47784.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





