Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiple antibiotic resistance protein marb | DIZ31_15950 | Not Available | Negative | 3134016 - 3134234 | 7570.05 |
| mdr efflux pump acrab transcriptional activator mara | DIZ31_15955 | Not Available | Negative | 3134266 - 3134649 | 15212.0 |
| multiple antibiotic resistance transcriptional regulator marr | DIZ31_15960 | Not Available | Negative | 3134670 - 3135104 | 16070.0 |
| stress protection protein marc | DIZ31_15965 | Not Available | Positive | 3135316 - 3135981 | 23646.8 |
| sugar efflux transporter | DIZ31_15970 | Not Available | Negative | 3136006 - 3137196 | 42549.9 |
| lysr family transcriptional regulator | DIZ31_15980 | Not Available | Negative | 3137535 - 3138416 | 32418.8 |
| succinate-semialdehyde dehydrogenase | DIZ31_15985 | Not Available | Positive | 3138517 - 3139905 | 49706.6 |
| glutaminase 2 | DIZ31_15990 | Not Available | Positive | 3139969 - 3140895 | 33517.6 |
| duf4186 domain-containing protein | DIZ31_15995 | Not Available | Positive | 3140895 - 3141254 | 13570.5 |
| ggdef domain-containing protein | DIZ31_16005 | Not Available | Positive | 3141864 - 3142811 | 34272.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





