Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ydfz | DIZ31_15895 | Not Available | Negative | 3125783 - 3125986 | 7276.83 |
| transcriptional regulator | DIZ31_15900 | Not Available | Negative | 3126163 - 3126849 | 26566.7 |
| nad(p)-dependent oxidoreductase | DIZ31_15905 | Not Available | Negative | 3126938 - 3127684 | 27248.5 |
| hypothetical protein | DIZ31_15910 | Not Available | Negative | 3127696 - 3127914 | 8092.31 |
| peptidyl-dipeptidase dcp | DIZ31_15915 | Not Available | Positive | 3127821 - 3129866 | 77645.8 |
| hypothetical protein | DIZ31_15925 | Not Available | Positive | 3129958 - 3130119 | 6364.81 |
| sensor domain-containing diguanylate cyclase | DIZ31_15930 | Not Available | Positive | 3130373 - 3131263 | 33881.4 |
| hypothetical protein | DIZ31_15935 | Not Available | Negative | 3131482 - 3131577 | 3509.36 |
| transporter | DIZ31_15940 | Not Available | Negative | 3131704 - 3132891 | 42739.6 |
| o-acetylserine/cysteine exporter | DIZ31_15945 | Not Available | Positive | 3133086 - 3133985 | 32314.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





