Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_15775 | Not Available | Negative | 3101581 - 3102003 | 15949.1 |
| paar domain-containing protein | DIZ31_15780 | Not Available | Negative | 3101996 - 3103414 | 52328.6 |
| type vi secretion system protein tssa | DIZ31_15785 | Not Available | Negative | 3103420 - 3105030 | 59974.0 |
| lysr family transcriptional regulator | DIZ31_15795 | Not Available | Positive | 3106929 - 3107822 | 33333.4 |
| rok family transcriptional regulator | DIZ31_15800 | Not Available | Positive | 3107957 - 3109177 | 44292.7 |
| dethiobiotin synthase | DIZ31_15805 | Not Available | Positive | 3109302 - 3109997 | 24968.4 |
| tat proofreading chaperone dmsd | DIZ31_15815 | Not Available | Negative | 3111403 - 3112017 | 23349.8 |
| dimethyl sulfoxide reductase anchor subunit | DIZ31_15820 | Not Available | Negative | 3112060 - 3112914 | 30544.6 |
| dimethylsulfoxide reductase | DIZ31_15825 | Not Available | Negative | 3112916 - 3113533 | 22752.9 |
| dimethyl sulfoxide reductase subunit a | DIZ31_15840 | Not Available | Negative | 3115174 - 3117600 | 89533.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





