Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type cleavage/methylation domain-containing protein | DIZ31_15675 | Not Available | Positive | 3074127 - 3074690 | 20413.4 |
| duf2509 domain-containing protein | DIZ31_15680 | Not Available | Positive | 3074687 - 3075094 | 14938.3 |
| prepilin-type cleavage/methylation domain-containing protein | DIZ31_15685 | Not Available | Positive | 3075079 - 3075402 | 12032.7 |
| exodeoxyribonuclease v subunit gamma | DIZ31_15690 | Not Available | Positive | 3075415 - 3078783 | 128834.0 |
| pitrilysin | DIZ31_15695 | Not Available | Positive | 3078959 - 3081847 | 107808.0 |
| exodeoxyribonuclease v subunit beta | DIZ31_15700 | Not Available | Positive | 3081840 - 3085382 | 134031.0 |
| exodeoxyribonuclease v subunit alpha | DIZ31_15705 | Not Available | Positive | 3085382 - 3087208 | 66705.1 |
| n-acetylglutamate synthase | DIZ31_15710 | Not Available | Negative | 3087290 - 3088621 | 49228.2 |
| n-acetylmuramoyl-l-alanine amidase | DIZ31_15715 | Not Available | Positive | 3088853 - 3090106 | 45637.1 |
| prd domain-containing protein | DIZ31_15720 | Not Available | Positive | 3090364 - 3091188 | 31967.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





