Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DIZ31_15625 | Not Available | Positive | 3063980 - 3065173 | 41627.1 |
| nadp(h)-dependent aldo-keto reductase | DIZ31_15630 | Not Available | Negative | 3065205 - 3066245 | 38531.7 |
| ygdi/ygdr family lipoprotein | DIZ31_15635 | Not Available | Negative | 3066353 - 3066571 | 7877.35 |
| terc family protein | DIZ31_15640 | Not Available | Negative | 3066709 - 3067422 | 26159.0 |
| dna mismatch repair protein muth | DIZ31_15645 | Not Available | Negative | 3067491 - 3068180 | 25515.0 |
| rna pyrophosphohydrolase | DIZ31_15650 | Not Available | Positive | 3068865 - 3069395 | 20796.0 |
| phosphoenolpyruvate-protein phosphotransferase ptsp | DIZ31_15655 | Not Available | Positive | 3069408 - 3071654 | 83720.7 |
| prolipoprotein diacylglyceryl transferase | DIZ31_15660 | Not Available | Positive | 3071805 - 3072680 | 33109.9 |
| thymidylate synthase | DIZ31_15665 | Not Available | Positive | 3072687 - 3073481 | 30481.4 |
| prepilin-type cleavage/methylation domain-containing protein | DIZ31_15670 | Not Available | Positive | 3073666 - 3074136 | 17935.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





