Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DIZ31_15570 | Not Available | Negative | 3050709 - 3054233 | 128824.0 |
| duf333 domain-containing protein | DIZ31_15575 | Not Available | Positive | 3054507 - 3054773 | 8765.56 |
| heat shock protein hslj | DIZ31_15580 | Not Available | Negative | 3054770 - 3055192 | 15105.5 |
| d-lactate dehydrogenase | DIZ31_15585 | Not Available | Negative | 3055303 - 3056292 | 36522.8 |
| ydbh family protein | DIZ31_15590 | Not Available | Positive | 3056500 - 3059139 | 96772.1 |
| ynbe family lipoprotein | DIZ31_15595 | Not Available | Positive | 3059136 - 3059321 | 6840.53 |
| duf1318 domain-containing protein | DIZ31_15600 | Not Available | Positive | 3059329 - 3059655 | 11994.5 |
| phenylacetic acid degradation protein paay | DIZ31_15610 | Not Available | Positive | 3060113 - 3060304 | 6790.4 |
| hypothetical protein | DIZ31_15615 | Not Available | Positive | 3060733 - 3061633 | 31416.1 |
| bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-acp synthetase | DIZ31_15620 | Not Available | Positive | 3061828 - 3063987 | 80786.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





