Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail protein | DIZ31_21200 | Not Available | Positive | 4069625 - 4070341 | 25411.9 |
| Putative tail assembly protein | DIZ31_21205 | Not Available | Positive | 4070356 - 4070730 | 14006.7 |
| Phage tail protein | DIZ31_21210 | Not Available | Positive | 4070754 - 4071035 | 10314.4 |
| Tail tape measure protein | DIZ31_21215 | Not Available | Positive | 4071083 - 4074325 | 115673.0 |
| Minor tail protein | DIZ31_21220 | Not Available | Positive | 4074318 - 4074659 | 13298.9 |
| Putative tail protein | DIZ31_21225 | Not Available | Positive | 4074659 - 4075357 | 25828.4 |
| Putative tail fiber component | DIZ31_21230 | Not Available | Positive | 4075368 - 4076111 | 28254.4 |
| Putative tail component | DIZ31_21235 | Not Available | Positive | 4076009 - 4076689 | 23795.8 |
| Putative tail fiber component j | DIZ31_21240 | Not Available | Positive | 4077032 - 4080505 | 126685.0 |
| Lom protein | DIZ31_21245 | Not Available | Positive | 4080573 - 4080956 | 14138.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





