Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_14815 | Not Available | Negative | 2896699 - 2896983 | 9971.24 |
| had family hydrolase | DIZ31_14820 | Not Available | Negative | 2897069 - 2897884 | 30251.1 |
| mfs transporter | DIZ31_14825 | Not Available | Negative | 2897884 - 2899092 | 41891.1 |
| dna-binding transcriptional regulator | DIZ31_14830 | Not Available | Positive | 2899176 - 2899712 | 20391.7 |
| transporter | DIZ31_14835 | Not Available | Negative | 2899888 - 2901573 | 60355.1 |
| hypothetical protein | DIZ31_14840 | Not Available | Positive | 2901842 - 2902219 | 14213.0 |
| grxa family glutaredoxin | DIZ31_14845 | Not Available | Negative | 2902249 - 2902506 | 9695.39 |
| duf1418 domain-containing protein | DIZ31_14850 | Not Available | Positive | 2902666 - 2902953 | 10532.4 |
| oxygen-insensitive nadph nitroreductase | DIZ31_14855 | Not Available | Positive | 2902937 - 2903659 | 26849.1 |
| 30s ribosomal protein s6--l-glutamate ligase | DIZ31_14860 | Not Available | Positive | 2903720 - 2904622 | 32438.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





