Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1266 domain-containing protein | DIZ31_14500 | Not Available | Negative | 2835842 - 2836549 | 27019.8 |
| sel1 repeat family protein | DIZ31_14505 | Not Available | Positive | 2836651 - 2837205 | 20847.8 |
| sel1 repeat family protein | DIZ31_14510 | Not Available | Positive | 2837282 - 2837500 | 7775.03 |
| zinc ribbon-containing protein | DIZ31_14515 | Not Available | Negative | 2837750 - 2838232 | 18798.2 |
| leucine--trna ligase | DIZ31_14520 | Not Available | Positive | 2838467 - 2841049 | 97240.0 |
| lps assembly lipoprotein lpte | DIZ31_14525 | Not Available | Positive | 2841064 - 2841645 | 21357.8 |
| dna polymerase iii subunit delta | DIZ31_14530 | Not Available | Positive | 2841645 - 2842676 | 38732.0 |
| nicotinate-nicotinamide nucleotide adenylyltransferase | DIZ31_14535 | Not Available | Positive | 2842678 - 2843319 | 24561.4 |
| adenosylcobalamin/alpha-ribazole phosphatase | DIZ31_14540 | Not Available | Positive | 2843343 - 2843954 | 23409.8 |
| ribosome silencing factor rsfs | DIZ31_14545 | Not Available | Positive | 2844214 - 2844531 | 11582.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





